STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105916231Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (195 aa)    
Predicted Functional Partners:
LOC105934945
Serine/threonine/tyrosine kinase 1b.
    
 0.761
ENSFHEP00000006741
Uncharacterized protein.
    
 
 0.705
LOC105922447
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.662
LOC105932783
Polymerase I and transcript release factor.
    
 
 0.657
LOC105939348
Fibroblast growth factor receptor.
    
 0.648
LOC105928781
Fibroblast growth factor receptor.
    
 0.648
fgfr3
Fibroblast growth factor receptor.
    
 0.648
ENSFHEP00000031486
Fibroblast growth factor receptor.
    
 0.648
ENSFHEP00000005656
Fibroblast growth factor receptor like 1a.
    
 0.645
stil
Uncharacterized protein.
    
 0.645
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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