STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asxl2ASXL transcriptional regulator 2. (1046 aa)    
Predicted Functional Partners:
bap1
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.994
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.986
KDM1B
Lysine demethylase 1B.
    
 0.916
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.896
mbd5
Methyl-CpG binding domain protein 5.
   
 0.851
LOC105938889
Forkhead box K2.
    
 0.804
LOC105920190
Uncharacterized protein.
    
 0.804
foxk1
Forkhead box K1.
    
 0.804
LOC105940314
Kinesin-associated protein 3b.
   
 0.801
LOC105921111
Kinesin-associated protein 3a.
   
 0.801
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.