STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000021708Si:ch211-66e2.5. (352 aa)    
Predicted Functional Partners:
LOC105924023
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.700
LOC105923824
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.700
LOC105921332
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.700
vcam1
Uncharacterized protein.
    
  0.645
mst1r
Macrophage-stimulating protein receptor.
  
 
  0.549
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
    
  0.538
itga4
Integrin alpha 4; Belongs to the integrin alpha chain family.
    
  0.538
LOC105920649
Bloodthirsty-related gene family, member 12.
  
 
   0.518
ENSFHEP00000025289
Apolipoprotein L, 1.
  
     0.506
LOC105930938
Integrin beta; Belongs to the integrin beta chain family.
    
 0.495
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.