STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105932428Glutamate receptor, metabotropic 1b. (1147 aa)    
Predicted Functional Partners:
LOC105925463
Homer scaffold protein 1b.
    
 0.976
LOC105933891
WH1 domain-containing protein.
    
 0.968
ENSFHEP00000011635
Uncharacterized protein.
    
 0.958
LOC105930745
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
    
  0.956
HOMER2
Homer scaffold protein 2.
    
  0.955
grm1
Glutamate receptor, metabotropic 1a.
  
  
 
0.953
LOC105915991
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.931
LOC105936828
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.914
LOC105917709
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.914
HOMER1
Homer scaffold protein 1.
    
  0.914
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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