STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000021790ANK_REP_REGION domain-containing protein. (129 aa)    
Predicted Functional Partners:
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
 0.974
LOC105921325
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
 
 0.835
e4f1
E4F transcription factor 1.
   
   0.774
lrrc45
Leucine rich repeat containing 45.
   
    0.756
nek8
NIMA-related kinase 8.
    
 
 0.744
LOC105937221
Nephronophthisis 1.
    
 0.634
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
   
 
 0.603
nphp3
Nephronophthisis 3.
   
 0.602
wdr90
WD repeat domain 90.
    
 0.591
ubxn7
UBX domain protein 7.
    
 0.576
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.