STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105936380Hairy-related 4, tandem duplicate 2. (208 aa)    
Predicted Functional Partners:
hes1
Hairy-related 6.
     
0.735
LOC105916117
Hairy-related 9.
     
0.735
ENSFHEP00000005695
Orange domain-containing protein.
     
 0.656
LOC105925220
Uncharacterized protein.
     
0.656
fancg
FA complementation group G.
    
  0.626
fancc
FA complementation group C.
    
  0.626
fancf
FA complementation group F.
    
  0.626
HES2
Hes family bHLH transcription factor 2, tandem duplicate 1.
     
0.605
LOC105936383
Hairy-related 12.
  
  
0.599
HES2-2
Hes family bHLH transcription factor 2, tandem duplicate 1.
     
0.567
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.