STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105931202Uncharacterized protein. (713 aa)    
Predicted Functional Partners:
btbd9
BTB (POZ) domain containing 9.
      
 0.512
ENSFHEP00000000334
Uncharacterized protein.
    
  0.511
LOC105929085
Uncharacterized protein.
  
 
  0.500
mrps33
Mitochondrial ribosomal protein S33.
    
 0.496
wdr24
WD repeat domain 24.
   
 
  0.494
LOC105922837
BRCT domain-containing protein.
    
  0.479
mrps26
Mitochondrial ribosomal protein S26.
   
  0.452
LOC105932699
Uncharacterized protein.
  
 
   0.445
YTHDC2
YTH domain containing 2.
    
  0.441
LOC105915958
Uncharacterized protein.
  
     0.440
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.