STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105938627Rho-GAP domain-containing protein. (451 aa)    
Predicted Functional Partners:
arhgap1
Rho GTPase activating protein 1.
     
0.535
LOC105939804
Si:dkey-91m11.5.
   
0.423
ABR
ABR activator of RhoGEF and GTPase.
   
0.423
LOC105932130
BCR activator of RhoGEF and GTPase.
   
0.423
ENSFHEP00000021677
DH domain-containing protein.
   
 0.423
LOC110368099
Uncharacterized protein.
    
 0.410
LOC105927124
Uncharacterized protein.
    
 0.410
LOC105920975
Uncharacterized protein.
    
 0.410
LOC105928052
Ras homolog family member Ca.
    
 0.410
LOC105929125
Transforming protein RhoA.
    
 0.410
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.