STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105915523X-ray repair complementing defective repair in Chinese hamster cells 4. (278 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.954
ENSFHEP00000025154
Uncharacterized protein.
  
  
 
0.952
wdr24
WD repeat domain 24.
    
 0.932
depdc5
DEP domain containing 5.
    
 0.928
wdr59
WD repeat domain 59.
    
 0.928
spcs1
Signal peptidase complex subunit 1.
   
 0.876
lig4
DNA ligase.
    
 0.873
spcs3
Signal peptidase complex subunit 3.
    
 0.872
ENSFHEP00000019690
Signal peptidase complex subunit 2.
   
 0.845
spcs2
Signal peptidase complex subunit 2.
   
 0.845
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.