STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx18Syntaxin 18. (338 aa)    
Predicted Functional Partners:
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
   
 0.999
zw10
Zw10 kinetochore protein.
    
 0.998
LOC105927882
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.994
LOC105939389
BCL2 interacting protein 1b.
   
 0.993
snx15
Sorting nexin 15.
    
 0.992
rint1
RAD50-interacting protein 1.
    
 0.992
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
    
 0.992
nbas
Neuroblastoma amplified sequence.
    
 0.992
LOC105925247
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
   
 0.991
ENSFHEP00000023737
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.976
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.