STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secisbp2SECIS binding protein 2. (778 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.948
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.847
ankrd45
ANK_REP_REGION domain-containing protein.
  
 0.837
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.837
LOC105936842
Calreticulin.
   
 0.819
LOC105931033
Calreticulin.
   
 0.819
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
 0.807
RPL30
Ribosomal protein L30.
   
 0.802
dld
Dihydrolipoyl dehydrogenase.
  
 0.782
gps1
G protein pathway suppressor 1.
    
 0.770
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.