STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam3cFamily with sequence similarity 3 member C. (248 aa)    
Predicted Functional Partners:
dag1
Dystroglycan 1.
     
 0.622
LOC105926111
Peptidase S72 domain-containing protein.
     
 0.622
pomt1
Protein-O-mannosyltransferase 1.
     
 0.579
pomt2
Protein-O-mannosyltransferase 2.
     
 0.579
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.579
LOC105924009
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
     
 0.579
ENSFHEP00000025231
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.579
mgat1
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a.
     
 0.579
LOC105917874
Stromal cell-derived factor 2.
     
 0.520
ENSFHEP00000028838
Transmembrane protein 126A.
      
 0.518
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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