STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cplx4Complexin 4a. (159 aa)    
Predicted Functional Partners:
LOC105916976
Phosducin b.
   
    0.896
CPLX2
Uncharacterized protein.
     
 0.795
CPLX1
Complexin-1.
     
 0.770
LOC105934853
Alpha-internexin; Belongs to the intermediate filament family.
   
    0.764
LOC105917938
Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.
   
    0.677
LOC105940294
Phosducin.
   
    0.607
mapk4
Mitogen-activated protein kinase 4; Belongs to the protein kinase superfamily.
    
 
 0.546
LOC105917541
Orthodenticle homeobox 2b.
   
  
 0.529
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.491
LOC105937758
Uncharacterized protein.
      
 0.491
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.