STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105917232SAM domain-containing protein. (555 aa)    
Predicted Functional Partners:
map2k7
Mitogen-activated protein kinase kinase 7.
   
 0.960
ENSFHEP00000026200
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.958
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.954
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.937
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
   
 0.872
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.869
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
   
 0.868
nlk
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.858
ube2n
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.857
LOC105916653
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.857
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.