STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbxtT-box transcription factor Tb. (436 aa)    
Predicted Functional Partners:
LOC105932118
POU domain protein.
   
 0.704
mixl1
Homeobox domain-containing protein.
   
 
 0.654
bmp4
Bone morphogenetic protein 4.
     
 0.632
snai2
Snail family zinc finger 2.
    
 0.623
foxa2
Forkhead box A2.
    
 0.613
eomes
Eomesodermin homolog b.
  
 
0.598
LOC105916893
Eomesodermin homolog a.
   
 
0.597
ENSFHEP00000034749
T-box brain transcription factor 1b.
   
 
0.597
LOC105926723
Forkhead box H1.
   
 
 0.595
gata4
GATA binding protein 4.
    
 0.587
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.