STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105935597Marker of proliferation Ki-67. (1771 aa)    
Predicted Functional Partners:
LOC105931261
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 
 0.698
ENSFHEP00000005309
Uncharacterized protein.
    
 0.698
ENSFHEP00000005371
Uncharacterized protein.
    
 0.698
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.680
pold1
DNA polymerase.
   
 0.653
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.627
LOC105926863
Survival of motor neuron 1, telomeric.
    
 0.627
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.588
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.588
ENSFHEP00000020981
TROVE domain-containing protein.
    
 0.578
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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