STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105917785Phosphatase 1 regulatory subunit 15B. (599 aa)    
Predicted Functional Partners:
LOC105932774
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.773
LOC105916101
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.773
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.773
LOC105925621
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.770
LOC105925566
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.770
exoc8
Exocyst complex component 8.
   
    0.673
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
      
 0.538
sec63
SEC63 homolog, protein translocation regulator.
      
 0.420
dstyk
Dual serine/threonine and tyrosine protein kinase.
      
 0.414
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
      
 0.412
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.