STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105920129Neuroligin 4 X-linked a. (792 aa)    
Predicted Functional Partners:
LOC105923295
Neurexin 1.
    
 0.974
LOC105933782
Neurexin 1.
    
 0.974
nrxn3
Uncharacterized protein.
    
 0.957
LOC105930625
Neurexin 3b.
    
 0.881
LOC105919851
Uncharacterized protein.
    
 0.762
ENSFHEP00000020285
Neurexin 2b.
    
 0.762
ENSFHEP00000034493
EGF-like domain-containing protein.
    
 0.762
wdr43
WD repeat domain 43.
   
 0.733
LOC105935339
Cytochrome b5 reductase 4.
    
 0.725
ENSFHEP00000029713
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.725
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.