Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSFHEP00000025518 | LOC105926650 | ENSFHEP00000025518 | ENSFHEP00000020383 | Endo/exonuclease/phosphatase domain-containing protein. | Si:ch211-141o9.10. | 0.798 |
ENSFHEP00000025518 | MUTYH | ENSFHEP00000025518 | ENSFHEP00000021727 | Endo/exonuclease/phosphatase domain-containing protein. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.745 |
ENSFHEP00000025518 | lig1 | ENSFHEP00000025518 | ENSFHEP00000023240 | Endo/exonuclease/phosphatase domain-containing protein. | DNA ligase. | 0.699 |
ENSFHEP00000025518 | nthl1 | ENSFHEP00000025518 | ENSFHEP00000026767 | Endo/exonuclease/phosphatase domain-containing protein. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.798 |
ENSFHEP00000025518 | ogg1 | ENSFHEP00000025518 | ENSFHEP00000002753 | Endo/exonuclease/phosphatase domain-containing protein. | 8-oxoguanine DNA glycosylase. | 0.742 |
ENSFHEP00000025518 | pcna | ENSFHEP00000025518 | ENSFHEP00000034210 | Endo/exonuclease/phosphatase domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.785 |
ENSFHEP00000025518 | snrpd2 | ENSFHEP00000025518 | ENSFHEP00000014060 | Endo/exonuclease/phosphatase domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.714 |
ENSFHEP00000025518 | snrpd3 | ENSFHEP00000025518 | ENSFHEP00000009518 | Endo/exonuclease/phosphatase domain-containing protein. | Small nuclear ribonucleoprotein Sm D3. | 0.750 |
ENSFHEP00000025518 | snrpf | ENSFHEP00000025518 | ENSFHEP00000002464 | Endo/exonuclease/phosphatase domain-containing protein. | Small nuclear ribonucleoprotein polypeptide F. | 0.696 |
ENSFHEP00000025518 | ung | ENSFHEP00000025518 | ENSFHEP00000013640 | Endo/exonuclease/phosphatase domain-containing protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.708 |
LOC105926650 | ENSFHEP00000025518 | ENSFHEP00000020383 | ENSFHEP00000025518 | Si:ch211-141o9.10. | Endo/exonuclease/phosphatase domain-containing protein. | 0.798 |
LOC105926650 | MUTYH | ENSFHEP00000020383 | ENSFHEP00000021727 | Si:ch211-141o9.10. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.640 |
LOC105926650 | lig1 | ENSFHEP00000020383 | ENSFHEP00000023240 | Si:ch211-141o9.10. | DNA ligase. | 0.693 |
LOC105926650 | nthl1 | ENSFHEP00000020383 | ENSFHEP00000026767 | Si:ch211-141o9.10. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.935 |
LOC105926650 | ogg1 | ENSFHEP00000020383 | ENSFHEP00000002753 | Si:ch211-141o9.10. | 8-oxoguanine DNA glycosylase. | 0.793 |
LOC105926650 | ung | ENSFHEP00000020383 | ENSFHEP00000013640 | Si:ch211-141o9.10. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.838 |
MUTYH | ENSFHEP00000025518 | ENSFHEP00000021727 | ENSFHEP00000025518 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Endo/exonuclease/phosphatase domain-containing protein. | 0.745 |
MUTYH | LOC105926650 | ENSFHEP00000021727 | ENSFHEP00000020383 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Si:ch211-141o9.10. | 0.640 |
MUTYH | lig1 | ENSFHEP00000021727 | ENSFHEP00000023240 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | DNA ligase. | 0.519 |
MUTYH | nthl1 | ENSFHEP00000021727 | ENSFHEP00000026767 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.930 |
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