STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105931896Bridging integrator 1a. (473 aa)    
Predicted Functional Partners:
LOC105916432
Bridging integrator 1b.
  
  
 
0.948
ENSFHEP00000003274
GED domain-containing protein.
 
  
 0.744
LOC105917121
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
 
  
 0.744
dnmbp
Dynamin binding protein.
    
 
 0.699
arhgef38
Rho guanine nucleotide exchange factor (GEF) 38.
    
 
 0.699
LOC105938894
Growth arrest-specific 7a.
    
 0.653
LOC110368626
Growth arrest specific 7.
    
 0.653
fcho2
FCH domain only 2.
    
 0.641
ENSFHEP00000009791
SH3-domain GRB2-like (endophilin) interacting protein 1a; Belongs to the adaptor complexes medium subunit family.
    
 0.641
ENSFHEP00000013423
SH3-domain GRB2-like (endophilin) interacting protein 1b; Belongs to the adaptor complexes medium subunit family.
    
 0.641
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.