STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105923828DnaJ heat shock protein family (Hsp40) member A1. (187 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
  
 0.858
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.832
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.815
LOC105919227
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.815
LOC105919467
TSC complex subunit 1.
  
 0.794
trap1
TNF receptor-associated protein 1.
  
 0.794
LOC105927446
TSC complex subunit 1b.
  
 0.794
ankrd45
ANK_REP_REGION domain-containing protein.
  
 0.782
LOC105939722
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.763
tmem59
Transmembrane protein 59.
  
 0.763
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.