nelfe protein (Fundulus heteroclitus) - STRING interaction network

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Predicted Interactions

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Score

nelfe

Negative elongation factor complex member E. (352 aa)

Predicted Functional Partners:

nelfa

0.996

nelfb

0.996

nelfcd

0.996

NCBP1

0.989

ncbp2

0.982

polr2a

0.977

supt5h

0.959

supt4h1

0.954

polr2c

0.945

LOC105928997

0.924

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105928997	NCBP1	ENSFHEP00000000060	ENSFHEP00000011943	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Nuclear cap binding protein subunit 1.	0.626
LOC105928997	ncbp2	ENSFHEP00000000060	ENSFHEP00000001553	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.674
LOC105928997	nelfb	ENSFHEP00000000060	ENSFHEP00000017729	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Negative elongation factor complex member B.	0.936
LOC105928997	nelfcd	ENSFHEP00000000060	ENSFHEP00000025461	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Negative elongation factor complex member C/D.	0.938
LOC105928997	nelfe	ENSFHEP00000000060	ENSFHEP00000026068	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Negative elongation factor complex member E.	0.924
LOC105928997	polr2a	ENSFHEP00000000060	ENSFHEP00000021794	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.826
LOC105928997	polr2c	ENSFHEP00000000060	ENSFHEP00000033546	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.826
LOC105928997	supt4h1	ENSFHEP00000000060	ENSFHEP00000007948	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.824
LOC105928997	supt5h	ENSFHEP00000000060	ENSFHEP00000028362	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	Transcription elongation factor SPT5.	0.862
NCBP1	LOC105928997	ENSFHEP00000011943	ENSFHEP00000000060	Nuclear cap binding protein subunit 1.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.626
NCBP1	ncbp2	ENSFHEP00000011943	ENSFHEP00000001553	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	nelfa	ENSFHEP00000011943	ENSFHEP00000009822	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member A.	0.755
NCBP1	nelfb	ENSFHEP00000011943	ENSFHEP00000017729	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member B.	0.903
NCBP1	nelfcd	ENSFHEP00000011943	ENSFHEP00000025461	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member C/D.	0.849
NCBP1	nelfe	ENSFHEP00000011943	ENSFHEP00000026068	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member E.	0.989
NCBP1	polr2a	ENSFHEP00000011943	ENSFHEP00000021794	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.777
NCBP1	polr2c	ENSFHEP00000011943	ENSFHEP00000033546	Nuclear cap binding protein subunit 1.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.766
NCBP1	supt4h1	ENSFHEP00000011943	ENSFHEP00000007948	Nuclear cap binding protein subunit 1.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.763
NCBP1	supt5h	ENSFHEP00000011943	ENSFHEP00000028362	Nuclear cap binding protein subunit 1.	Transcription elongation factor SPT5.	0.791
ncbp2	LOC105928997	ENSFHEP00000001553	ENSFHEP00000000060	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.674