STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000026146LSDAT_euk domain-containing protein. (189 aa)    
Predicted Functional Partners:
ENSFHEP00000026205
Ion_trans domain-containing protein.
 
  
 0.977
ENSFHEP00000026093
Ion_trans domain-containing protein.
 
   
 0.972
ENSFHEP00000007693
Uncharacterized protein.
 
   
 0.956
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.929
nudt5
Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family.
    
 0.914
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
  
  
0.893
LOC105919505
Ion_trans domain-containing protein.
 
  
 0.890
LOC105917431
Pribosyltran_N domain-containing protein.
     
 0.866
LOC105924867
Phosphoribosyl pyrophosphate synthetase 1B.
     
 0.866
trpv1
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.798
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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