STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105936737Transmembrane protein 110, like. (407 aa)    
Predicted Functional Partners:
mst1r
Macrophage-stimulating protein receptor.
    
 0.728
LOC105933677
Macrophage stimulating 1 receptor a.
    
 0.728
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.728
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.651
inppl1
Inositol polyphosphate phosphatase-like 1a.
    
  0.628
LOC105925713
Inositol polyphosphate phosphatase-like 1b.
    
  0.628
LOC105920702
Intersectin 2b.
   
 0.627
ENSFHEP00000007368
Uncharacterized protein.
   
 0.627
ENSFHEP00000025972
Uncharacterized protein.
   
 0.627
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.625
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.