STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105937976Protein YIPF. (302 aa)    
Predicted Functional Partners:
yipf6
Protein YIPF.
   
 
 0.808
yipf4
Protein YIPF.
   
 
 0.779
ENSFHEP00000008108
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.686
LOC105926475
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.686
yif1b
Yip1 interacting factor homolog B (S. cerevisiae).
   
  
 0.662
ENSFHEP00000026542
Yip1 domain family, member 3.
   
  
 0.646
yipf5
Protein YIPF.
   
 
 0.634
LOC105917875
Protein YIPF.
   
 
 0.634
selenos
Selenoprotein S.
   
 
 0.633
slc38a7
Solute carrier family 38 member 7.
      
 0.613
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.