STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929962Si:ch211-194b1.1. (1999 aa)    
Predicted Functional Partners:
LOC105927430
Euchromatic histone-lysine N-methyltransferase 1b.
   
 0.573
ehmt2
Euchromatic histone-lysine N-methyltransferase 2.
   
 0.573
LOC105915365
Euchromatic histone-lysine N-methyltransferase 1a.
   
 0.573
ENSFHEP00000000334
Uncharacterized protein.
    
  0.511
LOC105922837
BRCT domain-containing protein.
    
 0.485
znf644
Zinc finger protein 644a.
    
 
0.462
YTHDC2
YTH domain containing 2.
    
  0.441
LOC105938003
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.424
CTBP2
C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
   0.424
LOC105918376
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
   0.424
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.