STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929964Protein kinase N1b. (961 aa)    
Predicted Functional Partners:
LOC105927124
Uncharacterized protein.
    
 0.970
LOC105929125
Transforming protein RhoA.
    
 0.970
LOC105928052
Ras homolog family member Ca.
    
 0.961
pkn2
Protein kinase N2.
  
  
 
0.933
LOC105939768
Protein kinase N1a.
  
  
 
0.901
ENSFHEP00000015557
Uncharacterized protein.
  
  
 
0.901
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.809
ENSFHEP00000019207
Uncharacterized protein.
    
 0.768
LOC105935878
Uncharacterized protein.
    
 0.768
LOC105920975
Uncharacterized protein.
    
 0.699
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.