STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105931552Uncharacterized protein. (503 aa)    
Predicted Functional Partners:
dag1
Dystroglycan 1.
    
 0.712
LOC105926111
Peptidase S72 domain-containing protein.
    
 0.712
LOC105939523
Apolipoprotein Eb.
   
 0.568
LOC105923864
Apolipoprotein Ea.
   
 0.568
got2
Aspartate aminotransferase.
     
 0.556
ENSFHEP00000000237
Uncharacterized protein.
   
 0.502
nid1
Nidogen 1a.
   
 0.502
ENSFHEP00000013166
Uncharacterized protein.
   
 0.502
ENSFHEP00000013326
Uncharacterized protein.
   
 0.502
ENSFHEP00000013347
Uncharacterized protein.
   
 0.502
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (22%) [HD]