STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105919409Stathmin-like 4, like. (208 aa)    
Predicted Functional Partners:
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.682
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.675
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.659
nek1
NIMA-related kinase 1.
    
 
 0.657
LOC105935975
Vesicular inhibitory amino acid transporter.
   
  
 0.651
slc1a2
Solute carrier family 1 member 2b.
     
 0.638
gak
Cyclin G associated kinase.
   
 0.605
LOC105929361
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
      
 0.595
ubxn7
UBX domain protein 7.
    
 0.577
hunk
Hormonally up-regulated Neu-associated kinase.
    
 
 0.557
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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