STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kansl2KAT8 regulatory NSL complex subunit 2. (504 aa)    
Predicted Functional Partners:
LOC105926445
KAT8 regulatory NSL complex subunit 1a.
    
 0.990
wdr5
WD repeat domain 5.
    
 0.979
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.955
mcrs1
Microspherule protein 1.
   
 0.937
ENSFHEP00000011508
Uncharacterized protein.
    
 0.927
LOC105922510
PHD finger protein 20, a.
    
 0.927
wsb2
WD repeat and SOCS box containing 2.
    
 0.922
wsb1
WD repeat and SOCS box-containing protein 1.
    
 0.922
ENSFHEP00000025137
Uncharacterized protein.
    
 0.921
phf23
PHD finger protein 23b.
    
 0.876
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.