STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clip3CAP-GLY domain containing linker protein 3. (474 aa)    
Predicted Functional Partners:
kif17
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.710
bub3
BUB3 mitotic checkpoint protein.
    
 0.709
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.707
nudc
NudC nuclear distribution protein.
     
 0.620
ckap5
Cytoskeleton associated protein 5.
    
 
 0.615
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
    
  0.614
ENSFHEP00000009149
Uncharacterized protein.
    
 
 0.592
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.592
LOC105932429
Microtubule-associated protein, RP/EB family, member 3a.
    
 
 0.592
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.592
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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