STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgfr1op2FGFR1 oncogene partner 2. (215 aa)    
Predicted Functional Partners:
slmap
Sarcolemma associated protein a.
    
 
 0.966
pdcd10
Programmed cell death 10b.
    
 
 0.964
LOC105923971-2
MOB family member 4, phocein.
    
 
 0.963
LOC105931762
Uncharacterized protein.
    
 
 0.943
LOC105927162
Sarcolemma associated protein b.
    
 
 0.917
strip1
Striatin interacting protein 1.
    
 
 0.890
LOC105933841
Striatin interacting protein 2.
    
 
 0.890
LOC105930061
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.852
tbk1
TANK-binding kinase 1.
     
 0.781
ikbke
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
     
 0.781
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.