STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgcgSarcoglycan, gamma. (290 aa)    
Predicted Functional Partners:
sspn
Sarcospan (Kras oncogene-associated gene).
   
 0.804
sgcb
Sarcoglycan, beta (dystrophin-associated glycoprotein).
    
 0.795
LOC105932501
Sarcoglycan, alpha.
   
 0.789
dag1
Dystroglycan 1.
    
 0.756
LOC105926111
Peptidase S72 domain-containing protein.
    
 0.756
sgcd
Sarcoglycan, delta (dystrophin-associated glycoprotein).
  
 
0.593
SGCZ
Sarcoglycan zeta.
  
 
0.573
LOC105936250
Uncharacterized protein.
  
 
0.561
ENSFHEP00000014763
Fukutin related protein.
      
 0.547
meox2
Homeobox protein MOX-2.
   
  
 0.512
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.