STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myh11Myosin, heavy chain 11a, smooth muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1966 aa)    
Predicted Functional Partners:
LOC105931711
Myosin, light chain 9b, regulatory.
   
 0.986
LOC105937040
Uncharacterized protein.
   
 0.982
LOC105928965
Zgc:153867.
   
 0.982
MYL2
Myosin light chain 2.
   
 0.980
LOC105918176
Myosin regulatory light chain 12B.
   
 0.979
LOC105937817
Uncharacterized protein.
   
 0.979
LOC105940024
Actin, cytoplasmic 1.
   
 0.966
actb
Uncharacterized protein.
   
 0.964
MYL2-2
Myosin light chain 2.
   
 0.963
acta2
Actin alpha 2, smooth muscle.
   
 0.950
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.