STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htr5a5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b. (346 aa)    
Predicted Functional Partners:
LOC105935986
GNAS complex locus.
    
  0.925
gnas
Uncharacterized protein.
    
  0.925
GNAL
G protein subunit alpha L.
    
  0.920
LOC105921230
Uncharacterized protein.
    
  0.920
gng2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.866
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.866
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.837
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.837
LOC105933678
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.837
LOC105929361
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.837
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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