STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929788DnaJ (Hsp40) homolog, subfamily C, member 3b. (499 aa)    
Predicted Functional Partners:
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
0.965
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
   
 0.944
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
  
 0.935
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
0.931
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.893
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.887
ENSFHEP00000020686
DRBM domain-containing protein.
    
 0.877
hyou1
Hypoxia up-regulated 1.
  
 0.818
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
   
 0.804
ankrd45
ANK_REP_REGION domain-containing protein.
  
 0.795
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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