STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000031605NIDO domain-containing protein. (202 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.924
ENSFHEP00000027116
ZP domain-containing protein.
 
   
 0.775
LOC105933101
Fras1 related extracellular matrix 1b.
    
 0.648
frem1
Fras1 related extracellular matrix 1a.
    
 0.648
hgfac
HGF activator.
    
 0.646
habp2
Uncharacterized protein.
    
 0.646
ENSFHEP00000007863
Uncharacterized protein.
    
  0.622
fras1
Fraser extracellular matrix complex subunit 1.
    
  0.622
ENSFHEP00000013708
VWFD domain-containing protein.
 
      0.611
gle1
Uncharacterized protein.
    
 0.582
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.