STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT43Intraflagellar transport 43. (205 aa)    
Predicted Functional Partners:
wdr35
WD repeat-containing protein 35.
    
 0.995
IFT122
Intraflagellar transport 122.
    
 0.993
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.992
wdr19
WD repeat domain 19.
    
 0.991
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.878
ift74
Intraflagellar transport 74.
     
 0.855
ift81
Intraflagellar transport 81 homolog.
     
 0.835
ENSFHEP00000017952
Uncharacterized protein.
   
 
 0.826
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
     
 0.824
wdr34
WD repeat domain 34.
     
 0.805
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.