STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105919785Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
LOC105918680
ADAM metallopeptidase domain 17b.
     
0.726
LOC105927641
ADAM metallopeptidase domain 17a.
     
0.726
efna2
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
    
 0.708
ENSFHEP00000017022
Ephrin-A2a; Belongs to the ephrin family.
    
 0.708
spock1
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.
     
 0.686
LOC105936850
Si:ch1073-396h14.1.
  
  
0.673
LOC105928246
Heparin-binding EGF-like growth factor a.
     
 0.672
ENSFHEP00000022068
Uncharacterized protein.
     
 0.664
LOC105921840
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.664
notch1
Notch receptor 1b.
    
 0.643
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.