STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parvgParvin, gamma. (321 aa)    
Predicted Functional Partners:
LOC105918838
Uncharacterized protein.
   
 0.994
LOC105915787
Integrin linked kinase.
   
 0.991
LOC105917338
Paxillin b.
   
 0.969
parvb
Alpha-parvin.
  
  
0.948
LOC105929671
Parvin, alpha a.
  
  
0.948
actb
Uncharacterized protein.
    
 0.948
LOC105940024
Actin, cytoplasmic 1.
    
 0.943
pxn
Paxillin, putative.
   
 0.942
LOC105930938
Integrin beta; Belongs to the integrin beta chain family.
   
 0.931
itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.930
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.