STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000032449Uncharacterized protein. (862 aa)    
Predicted Functional Partners:
rb1cc1
RB1-inducible coiled-coil 1.
   
 0.970
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.838
ENSFHEP00000008600
Uncharacterized protein.
   
 
 0.673
rtn3
Reticulon.
    
 
 0.650
LOC105936151
RAN binding protein 2.
    
 0.638
tex264
Testis expressed 264, ER-phagy receptor a.
      
 0.619
LOC105925765
Atlastin 3.
      
 0.619
ENSFHEP00000030471
Uncharacterized protein.
      
 0.619
ENSFHEP00000003875
Reticulophagy regulator 1.
    
 
 0.596
rbbp5
Retinoblastoma binding protein 5.
    
 0.587
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.