STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr82WD repeat-containing protein 82. (313 aa)    
Predicted Functional Partners:
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.997
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.996
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.996
LOC105916746
FIP1 like 1b (S. cerevisiae).
   
 0.995
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase.
   
 0.992
WDR33
WD repeat domain 33.
   
 0.990
LOC105918688
Cleavage and polyadenylation specific factor 3.
   
 0.984
LOC105932774
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.983
CPSF3
CPSF73-100_C domain-containing protein.
   
 0.982
ENSFHEP00000010837
Lactamase_B domain-containing protein.
   
 0.982
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.