STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp33Ubiquitinyl hydrolase 1. (849 aa)    
Predicted Functional Partners:
ENSFHEP00000008079
Adrenoceptor beta 1.
    
 0.724
LOC105917086
Adrenoceptor beta 2, surface a; Belongs to the G-protein coupled receptor 1 family.
    
 0.724
ccp110
Uncharacterized protein.
    
 0.702
LOC105915744
Uncharacterized protein.
    
 0.702
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.696
lap3
Leucine aminopeptidase 3.
    
 0.686
rfc5
Replication factor C (activator 1) 5.
    
 0.672
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.633
LOC105922009
S-antigen; retina and pineal gland (arrestin) a.
    
 0.632
ENSFHEP00000003114
Uncharacterized protein.
    
 0.632
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.