STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (378 aa)    
Predicted Functional Partners:
wdr46
WD repeat domain 46.
   
   0.981
bysl
Bystin-like.
   
   0.976
fbl
Fibrillarin.
   
   0.964
DHX15
DEAH-box helicase 15.
   
 
 0.964
LOC105927929
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 
 0.964
nom1
Nucleolar protein with MIF4G domain 1.
   
   0.961
ENSFHEP00000004611
Eukaryotic translation initiation factor 4A3.
   
 
 0.959
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.959
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.939
gpatch2
G-patch domain-containing protein.
    
 
 0.938
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.