STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b3Solute carrier family 35 member B3. (392 aa)    
Predicted Functional Partners:
slc35c1
Solute carrier family 35 member C1.
   
  
 0.603
glce
Glucuronic acid epimerase b.
      
 0.574
LOC105918177
FAST kinase domains 3.
  
 
 0.573
tmem144
Transmembrane protein 144b.
      
 0.570
LOC105936228
RAP domain-containing protein.
  
 
 0.567
pepd
Peptidase D.
  
 
 0.567
slc35c2
Solute carrier family 35 member C2.
      
 0.560
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
    
 0.545
xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound; Belongs to the peptidase M24B family.
    
 0.545
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
    
 0.545
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.