STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105919719WT1 interacting protein. (681 aa)    
Predicted Functional Partners:
lats2
Serine/threonine-protein kinase LATS2.
    
 0.883
lats1
Large tumor suppressor kinase 1.
    
 0.883
sav1
Salvador family WW domain containing protein 1.
   
 0.857
haus1
HAUS augmin-like complex, subunit 1.
   
 0.831
haus3
HAUS augmin complex subunit 3-like protein.
   
 0.827
haus8
Uncharacterized protein.
    
 0.813
ENSFHEP00000004424
Uncharacterized protein.
    
 0.766
rbm42
RNA binding motif protein 42.
    
 0.766
LOC105916827
Ajuba LIM protein.
    
 
0.742
haus2
Uncharacterized protein.
    
 0.728
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.