STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105922859Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
LLGL1
LLGL scribble cell polarity complex component 1.
    
 0.960
ENSFHEP00000004576
Uncharacterized protein.
    
 0.942
ENSFHEP00000029367
Uncharacterized protein.
    
 0.942
LOC105936938
Uncharacterized protein; Belongs to the MAGUK family.
  
  
 
0.901
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
0.824
LOC105921523
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
0.824
LOC105919464
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 0.817
LOC105927414
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.817
ENSFHEP00000000334
Uncharacterized protein.
   
 0.811
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.764
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.