STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000034537Rho GTPase activating protein 17b. (260 aa)    
Predicted Functional Partners:
ENSFHEP00000021456
Angiomotin.
    
 0.933
LOC105934100
Cell division control protein 42.
   
 0.919
LOC105928568
Cell division control protein 42.
   
 0.919
LOC105931589
Uncharacterized protein.
   
 0.919
CDC42
Cell division control protein 42.
   
 0.919
LOC105935716
Rac family small GTPase 3b.
   
  0.914
LOC105935604
Uncharacterized protein.
   
  0.914
LOC105930058
Ras-related C3 botulinum toxin substrate 1.
   
  0.914
LOC105935606
Uncharacterized protein.
   
  0.914
LOC105931543
Uncharacterized protein.
   
 0.913
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.