STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd24Ankyrin repeat domain 24. (886 aa)    
Predicted Functional Partners:
ENSFHEP00000020349
ANK_REP_REGION domain-containing protein.
 
      0.899
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.605
ubxn7
UBX domain protein 7.
    
 0.576
ift81
Intraflagellar transport 81 homolog.
    
 0.570
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.547
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.543
traf7
TNF receptor-associated factor 7.
    
 0.538
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.530
REL
REL proto-oncogene, NF-kB subunit.
   
 0.527
LOC105925551
RHD domain-containing protein.
   
 0.527
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.