STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgf29SAGA complex associated factor 29. (300 aa)    
Predicted Functional Partners:
supt20h
SPT20 homolog, SAGA complex component.
    
 0.998
LOC105924034
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.998
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.998
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.998
tada2a
Transcriptional adapter.
    
 0.998
supt3h
Uncharacterized protein.
    
 0.998
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.998
kat14
Lysine acetyltransferase 14.
   
 0.997
zzz3
Zinc finger, ZZ-type containing 3.
    
 0.996
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.994
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (12%) [HD]